Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm25076-201ENSMUST00000104098 132 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm8492-201ENSMUST00000182375 987 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm17877-201ENSMUST00000192578 814 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm37458-201ENSMUST00000194055 410 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm44329-201ENSMUST00000197469 112 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx29Q9D3S3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm28937-201ENSMUST00000185413 695 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm29400-201ENSMUST00000187208 695 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm28662-201ENSMUST00000188446 695 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm28251-201ENSMUST00000188835 695 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm9136-201ENSMUST00000193368 454 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm37318-201ENSMUST00000194325 695 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm38017-201ENSMUST00000194768 695 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm37287-201ENSMUST00000195449 695 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm37793-201ENSMUST00000195548 695 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx29Q9D3S3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Gm12036-201ENSMUST00000120008 530 ntBASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx29Q9D3S3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms