Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Gm12928-201ENSMUST00000117115 573 ntBASIC12.09□□□□□ -0.47
Trim42Q9D2H5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim42Q9D2H5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trim42Q9D2H5 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim42Q9D2H5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trim42Q9D2H5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.08□□□□□ -0.47
Trim42Q9D2H5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Gm16215-201ENSMUST00000161990 637 ntBASIC12.08□□□□□ -0.48
Trim42Q9D2H5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.08□□□□□ -0.48
Trim42Q9D2H5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms