Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssu72Q9CY97 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Gm23984-201ENSMUST00000157139 203 ntBASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Gm24548-201ENSMUST00000158650 108 ntBASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Gm37201-201ENSMUST00000191845 523 ntBASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Gm38314-201ENSMUST00000195709 625 ntBASIC11.92□□□□□ -0.5
Ssu72Q9CY97 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssu72Q9CY97 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm3890-201ENSMUST00000182416 207 ntBASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm29649-201ENSMUST00000185649 419 ntBASIC11.91□□□□□ -0.5
Ssu72Q9CY97 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gm6091-201ENSMUST00000098307 165 ntBASIC11.91□□□□□ -0.5
Ssu72Q9CY97 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssu72Q9CY97 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms