Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Mir5132-201ENSMUST00000175166 71 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm25732-201ENSMUST00000175168 60 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm27552-201ENSMUST00000183351 62 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm27844-201ENSMUST00000183613 62 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm18944-201ENSMUST00000207672 643 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm5455-201ENSMUST00000058710 715 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm25131-201ENSMUST00000082653 151 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.49□□□□□ -0.57
Otud1Q9CUB6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Otud1Q9CUB6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 AY036118-201ENSMUST00000200021 923 ntBASIC11.48□□□□□ -0.57
Otud1Q9CUB6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Otud1Q9CUB6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Otud1Q9CUB6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms