Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Rmrp-201ENSMUST00000157463 271 ntBASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gm5354-201ENSMUST00000182417 973 ntBASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm13223-201ENSMUST00000118609 747 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm44397-201ENSMUST00000195950 113 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms