Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ska1Q9CPV1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ska1Q9CPV1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ska1Q9CPV1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 BC043934-202ENSMUST00000185694 2356 ntBASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Gm12390-201ENSMUST00000117897 397 ntBASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.39□□□□□ -0.59
Ska1Q9CPV1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ska1Q9CPV1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.38□□□□□ -0.59
Ska1Q9CPV1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Gm8602-201ENSMUST00000184045 607 ntBASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Gm45930-201ENSMUST00000221330 292 ntBASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ska1Q9CPV1 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms