Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm44124-201ENSMUST00000204159 472 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm7783-201ENSMUST00000204795 781 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim33Q99PP7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim33Q99PP7 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.04□□□□□ -0.48
Trim33Q99PP7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.03□□□□□ -0.48
Trim33Q99PP7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.03□□□□□ -0.48
Trim33Q99PP7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Gm15547-201ENSMUST00000122152 333 ntBASIC12.03□□□□□ -0.48
Trim33Q99PP7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.03□□□□□ -0.48
Trim33Q99PP7 Gm8712-201ENSMUST00000221090 701 ntBASIC12.03□□□□□ -0.48
Trim33Q99PP7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim33Q99PP7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.03□□□□□ -0.48
Trim33Q99PP7 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.03□□□□□ -0.48
Trim33Q99PP7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim33Q99PP7 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.02□□□□□ -0.48
Trim33Q99PP7 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.02□□□□□ -0.48
Trim33Q99PP7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim33Q99PP7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trim33Q99PP7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim33Q99PP7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim33Q99PP7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim33Q99PP7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms