Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm18165-201ENSMUST00000217426 928 ntBASIC11.82□□□□□ -0.52
Trim8Q99PJ2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.82□□□□□ -0.52
Trim8Q99PJ2 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.82□□□□□ -0.52
Trim8Q99PJ2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim8Q99PJ2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm13736-201ENSMUST00000119272 253 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm11591-201ENSMUST00000120063 702 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 AY702102-202ENSMUST00000194651 1173 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim8Q99PJ2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trim8Q99PJ2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms