Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Gm11340-201ENSMUST00000119226 412 ntBASIC14.16□□□□□ -0.14
Hdac9Q99N13 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Gm44329-201ENSMUST00000197469 112 ntBASIC14.16□□□□□ -0.14
Hdac9Q99N13 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Gm3793-201ENSMUST00000204973 672 ntBASIC14.16□□□□□ -0.14
Hdac9Q99N13 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.16□□□□□ -0.14
Hdac9Q99N13 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.16□□□□□ -0.14
Hdac9Q99N13 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.16□□□□□ -0.14
Hdac9Q99N13 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 Gm12407-201ENSMUST00000180219 324 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 Gm5706-201ENSMUST00000181525 993 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.15□□□□□ -0.14
Hdac9Q99N13 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac9Q99N13 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hdac9Q99N13 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.15□□□□□ -0.15
Hdac9Q99N13 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm25880-201ENSMUST00000104331 132 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm26013-201ENSMUST00000104404 119 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm22711-201ENSMUST00000116890 133 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Mir1956-201ENSMUST00000157748 65 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm24844-201ENSMUST00000158679 127 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm10731-201ENSMUST00000181171 448 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm6108-201ENSMUST00000208365 367 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac9Q99N13 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.14□□□□□ -0.15
Hdac9Q99N13 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms