Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm18056-201ENSMUST00000207670 568 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm18061-201ENSMUST00000208350 562 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm18063-201ENSMUST00000208529 568 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm18052-201ENSMUST00000208750 559 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.74□□□□□ -0.53
Msh4Q99MT2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh4Q99MT2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm9022-201ENSMUST00000182482 992 ntBASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm8885-201ENSMUST00000189382 598 ntBASIC11.73□□□□□ -0.53
Msh4Q99MT2 AA914427-201ENSMUST00000193194 1166 ntBASIC11.73□□□□□ -0.53
Msh4Q99MT2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm44967-201ENSMUST00000207047 631 ntBASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.73□□□□□ -0.53
Msh4Q99MT2 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.73□□□□□ -0.53
Msh4Q99MT2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.73□□□□□ -0.53
Msh4Q99MT2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.73□□□□□ -0.53
Msh4Q99MT2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh4Q99MT2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.72□□□□□ -0.53
Msh4Q99MT2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.72□□□□□ -0.53
Msh4Q99MT2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Gm15236-201ENSMUST00000117309 379 ntBASIC11.72□□□□□ -0.53
Msh4Q99MT2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms