Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx6-1Q99MA9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nkx6-1Q99MA9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nkx6-1Q99MA9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm11836-201ENSMUST00000121022 441 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm11980-201ENSMUST00000121445 986 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm29499-201ENSMUST00000189151 486 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm28329-201ENSMUST00000191208 689 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm29171-201ENSMUST00000191397 486 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm25201-201ENSMUST00000083093 170 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm8325-201ENSMUST00000099086 453 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-1Q99MA9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-1Q99MA9 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms