Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Gm24845-201ENSMUST00000158034 109 ntBASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Gm43118-201ENSMUST00000199149 775 ntBASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Gm45880-201ENSMUST00000213041 853 ntBASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Morn2-202ENSMUST00000227729 656 ntBASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cstf3Q99LI7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cstf3Q99LI7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.65□□□□□ -0.55
Cstf3Q99LI7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cstf3Q99LI7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cstf3Q99LI7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cstf3Q99LI7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cstf3Q99LI7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cstf3Q99LI7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm5950-201ENSMUST00000213337 772 ntBASIC11.64□□□□□ -0.55
Cstf3Q99LI7 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm9996-201ENSMUST00000070359 913 ntBASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.64□□□□□ -0.55
Cstf3Q99LI7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm11531-201ENSMUST00000117614 555 ntBASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm4986-201ENSMUST00000119731 549 ntBASIC11.63□□□□□ -0.55
Cstf3Q99LI7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.63□□□□□ -0.55
Cstf3Q99LI7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms