Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm13117-201ENSMUST00000120894 691 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm10169-201ENSMUST00000121822 348 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm5257-201ENSMUST00000121823 790 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm8459-201ENSMUST00000162504 760 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm3726-201ENSMUST00000203110 785 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.81□□□□□ -0.04
RtcbQ99LF4 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.8□□□□□ -0.04
RtcbQ99LF4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.8□□□□□ -0.04
RtcbQ99LF4 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RtcbQ99LF4 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.8□□□□□ -0.04
RtcbQ99LF4 Gm23105-201ENSMUST00000083719 134 ntBASIC14.8□□□□□ -0.04
RtcbQ99LF4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RtcbQ99LF4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gm12948-201ENSMUST00000119406 682 ntBASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.79□□□□□ -0.04
RtcbQ99LF4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.79□□□□□ -0.04
RtcbQ99LF4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gm9630-201ENSMUST00000178304 885 ntBASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gm18460-201ENSMUST00000208088 464 ntBASIC14.79□□□□□ -0.04
RtcbQ99LF4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RtcbQ99LF4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms