Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Gm12407-201ENSMUST00000180219 324 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Gm3551-201ENSMUST00000190750 664 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Gm6108-201ENSMUST00000208365 367 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd2Q99JR8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.15□□□□□ -0.47
Smarcd2Q99JR8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Smarcd2Q99JR8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Smarcd2Q99JR8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Smarcd2Q99JR8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smarcd2Q99JR8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smarcd2Q99JR8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm11675-201ENSMUST00000121873 832 ntBASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm22442-201ENSMUST00000157256 144 ntBASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm3150-201ENSMUST00000166418 204 ntBASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm17877-201ENSMUST00000192578 814 ntBASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcd2Q99JR8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.13□□□□□ -0.47
Smarcd2Q99JR8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms