Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm28329-201ENSMUST00000191208 689 ntBASIC14.18□□□□□ -0.14
Col20a1Q923P0 Gm29171-201ENSMUST00000191397 486 ntBASIC14.18□□□□□ -0.14
Col20a1Q923P0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.18□□□□□ -0.14
Col20a1Q923P0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.18□□□□□ -0.14
Col20a1Q923P0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Gm6867-201ENSMUST00000219165 425 ntBASIC14.18□□□□□ -0.14
Col20a1Q923P0 Gm29787-201ENSMUST00000222129 849 ntBASIC14.18□□□□□ -0.14
Col20a1Q923P0 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.18□□□□□ -0.14
Col20a1Q923P0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.18□□□□□ -0.14
Col20a1Q923P0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col20a1Q923P0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm12579-201ENSMUST00000118040 783 ntBASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm15566-201ENSMUST00000121130 590 ntBASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm15881-201ENSMUST00000148792 942 ntBASIC14.17□□□□□ -0.14
Col20a1Q923P0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm9540-201ENSMUST00000188230 478 ntBASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm10179-201ENSMUST00000086233 688 ntBASIC14.17□□□□□ -0.14
Col20a1Q923P0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.17□□□□□ -0.14
Col20a1Q923P0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.17□□□□□ -0.14
Col20a1Q923P0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col20a1Q923P0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm7666-201ENSMUST00000146631 819 ntBASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm22144-201ENSMUST00000157402 102 ntBASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm27390-201ENSMUST00000184516 176 ntBASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm42599-201ENSMUST00000201308 469 ntBASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm5051-201ENSMUST00000204085 485 ntBASIC14.16□□□□□ -0.14
Col20a1Q923P0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col20a1Q923P0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms