Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Gm6023-201ENSMUST00000118217 606 ntBASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhga11Q91XY8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Gm14723-201ENSMUST00000118686 215 ntBASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Gm43822-201ENSMUST00000200285 476 ntBASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Gm18935-201ENSMUST00000212692 664 ntBASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga11Q91XY8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga11Q91XY8 Gm24934-201ENSMUST00000103764 111 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms