Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga6Q91XY2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm22133-201ENSMUST00000102082 109 ntBASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm25881-201ENSMUST00000157783 103 ntBASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm4607-201ENSMUST00000206649 577 ntBASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm9463-201ENSMUST00000206707 601 ntBASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga6Q91XY2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm24891-201ENSMUST00000104391 136 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm12196-201ENSMUST00000120954 262 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm23085-201ENSMUST00000157849 293 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm37246-201ENSMUST00000192665 835 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm37905-201ENSMUST00000195310 341 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm34023-201ENSMUST00000195539 217 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Gm270-201ENSMUST00000223010 976 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga6Q91XY2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms