Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Gm38158-201ENSMUST00000194617 339 ntBASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Gm18422-201ENSMUST00000203663 1032 ntBASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Gm46136-201ENSMUST00000214730 565 ntBASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 AC132833.3-201ENSMUST00000227472 866 ntBASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Gm24919-201ENSMUST00000083020 106 ntBASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb17Q91VD8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm11793-201ENSMUST00000120433 981 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm11964-201ENSMUST00000120982 444 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm15780-201ENSMUST00000121283 935 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm27572-201ENSMUST00000183702 255 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm6013-201ENSMUST00000212264 699 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm45880-201ENSMUST00000213041 853 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm4778-201ENSMUST00000098878 1098 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm43589-201ENSMUST00000199400 1523 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb17Q91VD8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb17Q91VD8 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb17Q91VD8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Pcdhb17Q91VD8 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb17Q91VD8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb17Q91VD8 Daam2-202ENSMUST00000224595 1926 ntBASIC13.16□□□□□ -0.3
Pcdhb17Q91VD8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb17Q91VD8 Mir1247-201ENSMUST00000116706 82 ntBASIC13.16□□□□□ -0.3
Pcdhb17Q91VD8 Gm13731-201ENSMUST00000117332 196 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms