Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rprd1aQ8VDS4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Gm14208-201ENSMUST00000119645 678 ntBASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Gm24749-201ENSMUST00000157838 343 ntBASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rprd1aQ8VDS4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Gm24990-201ENSMUST00000157406 323 ntBASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Gm5363-201ENSMUST00000211927 938 ntBASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rprd1aQ8VDS4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rprd1aQ8VDS4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms