Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Gm11451-201ENSMUST00000118946 630 ntBASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gm16071-201ENSMUST00000119589 793 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gm12516-201ENSMUST00000120819 385 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gm11836-201ENSMUST00000121022 441 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gm21092-201ENSMUST00000178995 955 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gm17826-201ENSMUST00000189720 798 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gm34023-201ENSMUST00000195539 217 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp7Q8R1T1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Gm1848-201ENSMUST00000120711 789 ntBASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Gm16397-201ENSMUST00000122201 494 ntBASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Gm38210-201ENSMUST00000191944 809 ntBASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Gm44506-201ENSMUST00000206278 965 ntBASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.35■□□□□ 0.05
Chmp7Q8R1T1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm22711-201ENSMUST00000116890 133 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm12795-201ENSMUST00000117594 539 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm24844-201ENSMUST00000158679 127 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm12407-201ENSMUST00000180219 324 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm10731-201ENSMUST00000181171 448 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 AC154257.1-202ENSMUST00000224729 843 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms