Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.07□□□□□ -0.48
Scara5Q8K299 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scara5Q8K299 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm1848-201ENSMUST00000120711 789 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm15595-201ENSMUST00000120840 961 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.07□□□□□ -0.48
Scara5Q8K299 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm28686-201ENSMUST00000187404 609 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.07□□□□□ -0.48
Scara5Q8K299 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.07□□□□□ -0.48
Scara5Q8K299 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Scara5Q8K299 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.07□□□□□ -0.48
Scara5Q8K299 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.07□□□□□ -0.48
Scara5Q8K299 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scara5Q8K299 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scara5Q8K299 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm11663-201ENSMUST00000117888 290 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm7722-201ENSMUST00000120646 741 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm22442-201ENSMUST00000157256 144 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Scara5Q8K299 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.06□□□□□ -0.48
Scara5Q8K299 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scara5Q8K299 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Scara5Q8K299 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.05□□□□□ -0.48
Scara5Q8K299 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scara5Q8K299 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scara5Q8K299 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Scara5Q8K299 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms