Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Gm38188-201ENSMUST00000192879 856 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Gm18893-201ENSMUST00000198416 943 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Gm44262-201ENSMUST00000204969 372 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 AC125539.1-201ENSMUST00000227423 622 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.93□□□□□ -0.18
Rtn1Q8K0T0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Gm9136-201ENSMUST00000193368 454 ntBASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Gm4607-201ENSMUST00000206649 577 ntBASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rtn1Q8K0T0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gm15074-201ENSMUST00000117603 936 ntBASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gm17812-201ENSMUST00000204935 318 ntBASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Gm8913-201ENSMUST00000209491 641 ntBASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rtn1Q8K0T0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms