Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm42599-201ENSMUST00000201308 469 ntBASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.33□□□□□ -0.44
CopaQ8CIE6 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.33□□□□□ -0.44
CopaQ8CIE6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CopaQ8CIE6 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopaQ8CIE6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm14208-201ENSMUST00000119645 678 ntBASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm18753-201ENSMUST00000201000 566 ntBASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm44262-201ENSMUST00000204969 372 ntBASIC12.32□□□□□ -0.44
CopaQ8CIE6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CopaQ8CIE6 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm10312-201ENSMUST00000078515 489 ntBASIC12.32□□□□□ -0.44
CopaQ8CIE6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.32□□□□□ -0.44
CopaQ8CIE6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.32□□□□□ -0.44
CopaQ8CIE6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopaQ8CIE6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Gm4909-201ENSMUST00000118749 794 ntBASIC12.31□□□□□ -0.44
CopaQ8CIE6 Gm14277-201ENSMUST00000121195 360 ntBASIC12.31□□□□□ -0.44
CopaQ8CIE6 Gm11597-201ENSMUST00000121423 964 ntBASIC12.31□□□□□ -0.44
CopaQ8CIE6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms