Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm37201-201ENSMUST00000191845 523 ntBASIC14.22□□□□□ -0.13
Nup88Q8CEC0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Gm3786-201ENSMUST00000202659 378 ntBASIC14.21□□□□□ -0.13
Nup88Q8CEC0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.21□□□□□ -0.13
Nup88Q8CEC0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup88Q8CEC0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Nup88Q8CEC0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nup88Q8CEC0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nup88Q8CEC0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup88Q8CEC0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup88Q8CEC0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup88Q8CEC0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Mir3547-201ENSMUST00000175461 88 ntBASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gm19208-201ENSMUST00000213861 912 ntBASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nup88Q8CEC0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms