Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim52Q8CDV4 Gm8342-201ENSMUST00000209839 757 ntBASIC14.78□□□□□ -0.04
Trim52Q8CDV4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim52Q8CDV4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim52Q8CDV4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim52Q8CDV4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim52Q8CDV4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim52Q8CDV4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim52Q8CDV4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim52Q8CDV4 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim52Q8CDV4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Gm8194-201ENSMUST00000159783 859 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Gm34023-201ENSMUST00000195539 217 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Gm5451-201ENSMUST00000080545 579 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim52Q8CDV4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim52Q8CDV4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms