Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf31Q8CCF0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf31Q8CCF0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf31Q8CCF0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Gm27530-201ENSMUST00000184096 98 ntBASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf31Q8CCF0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm13035-201ENSMUST00000117496 342 ntBASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm12196-201ENSMUST00000120954 262 ntBASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm20426-201ENSMUST00000173657 440 ntBASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm5369-201ENSMUST00000217499 588 ntBASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf31Q8CCF0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Gm14058-201ENSMUST00000116082 735 ntBASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Gm12857-201ENSMUST00000117678 592 ntBASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Gm15610-201ENSMUST00000120584 195 ntBASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 Gm23699-201ENSMUST00000158835 135 ntBASIC13.15□□□□□ -0.3
Prpf31Q8CCF0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms