Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Gm18304-201ENSMUST00000189162 546 ntBASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.04□□□□□ -0.16
Vps53Q8CCB4 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.04□□□□□ -0.16
Vps53Q8CCB4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Gm10312-201ENSMUST00000078515 489 ntBASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.04□□□□□ -0.16
Vps53Q8CCB4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Matn2-203ENSMUST00000226766 3252 ntBASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Gm13296-201ENSMUST00000117854 997 ntBASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Gm13736-201ENSMUST00000119272 253 ntBASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps53Q8CCB4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.02□□□□□ -0.16
Vps53Q8CCB4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Vps53Q8CCB4 Gm23200-201ENSMUST00000104379 132 ntBASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Gm12314-201ENSMUST00000118104 538 ntBASIC14.02□□□□□ -0.17
Vps53Q8CCB4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Gm23119-201ENSMUST00000158610 140 ntBASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.02□□□□□ -0.17
Vps53Q8CCB4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms