Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim9Q8C7M3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm11511-201ENSMUST00000118146 540 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm13350-201ENSMUST00000120519 479 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm25700-201ENSMUST00000177693 110 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm43962-201ENSMUST00000203898 190 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm44967-201ENSMUST00000207047 631 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Olfr582-201ENSMUST00000098212 960 ntBASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim9Q8C7M3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm13296-201ENSMUST00000117854 997 ntBASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm17376-201ENSMUST00000166016 84 ntBASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm9192-201ENSMUST00000183221 985 ntBASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm8956-201ENSMUST00000203939 825 ntBASIC13.24□□□□□ -0.29
Trim9Q8C7M3 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms