Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Gm13813-201ENSMUST00000120998 787 ntBASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Gm22121-201ENSMUST00000175148 54 ntBASIC10.78□□□□□ -0.68
Rft1Q8C3B8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.78□□□□□ -0.68
Rft1Q8C3B8 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.78□□□□□ -0.68
Rft1Q8C3B8 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rft1Q8C3B8 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rft1Q8C3B8 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rft1Q8C3B8 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rft1Q8C3B8 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rft1Q8C3B8 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Gm12291-201ENSMUST00000121627 311 ntBASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Gm23363-201ENSMUST00000175024 79 ntBASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Gm42627-201ENSMUST00000197347 224 ntBASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Gm8099-201ENSMUST00000200510 742 ntBASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Gm18584-201ENSMUST00000203098 964 ntBASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.77□□□□□ -0.69
Rft1Q8C3B8 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rft1Q8C3B8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.76□□□□□ -0.69
Rft1Q8C3B8 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rft1Q8C3B8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Rft1Q8C3B8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.76□□□□□ -0.69
Rft1Q8C3B8 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms