Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm45638-201ENSMUST00000211507 2878 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Paupar-201ENSMUST00000194826 3482 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm29499-201ENSMUST00000189151 486 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm28329-201ENSMUST00000191208 689 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm29171-201ENSMUST00000191397 486 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm23745-201ENSMUST00000104230 125 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm12791-201ENSMUST00000120788 655 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm8152-201ENSMUST00000120842 637 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm27444-201ENSMUST00000184157 137 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm28686-201ENSMUST00000187404 609 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd9Q8BYH8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm11244-201ENSMUST00000121243 237 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm4943-201ENSMUST00000132879 424 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm5976-201ENSMUST00000180794 996 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm32102-201ENSMUST00000196885 241 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 AC156790.2-201ENSMUST00000227115 568 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms