Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Gm9083-201ENSMUST00000120423 819 ntBASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm15808-201ENSMUST00000119046 604 ntBASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm24845-201ENSMUST00000158034 109 ntBASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm18304-201ENSMUST00000189162 546 ntBASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4Q8BQZ5 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm12314-201ENSMUST00000118104 538 ntBASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm13570-201ENSMUST00000140763 309 ntBASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm4034-201ENSMUST00000187674 480 ntBASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm42937-201ENSMUST00000197360 752 ntBASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Gm10076-201ENSMUST00000073238 384 ntBASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4Q8BQZ5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms