Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gm44405-201ENSMUST00000198952 126 ntBASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gm9257-201ENSMUST00000221254 232 ntBASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh20Q8BIZ0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm12058-201ENSMUST00000118614 437 ntBASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm20482-202ENSMUST00000174729 825 ntBASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm30285-201ENSMUST00000214614 422 ntBASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh20Q8BIZ0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gm24255-201ENSMUST00000104481 128 ntBASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gm27023-201ENSMUST00000182372 285 ntBASIC11.75□□□□□ -0.53
Pcdh20Q8BIZ0 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms