Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm12501-201ENSMUST00000119163 529 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm5616-201ENSMUST00000165252 384 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm8741-201ENSMUST00000174736 384 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Mir7677-201ENSMUST00000184226 67 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm19353-201ENSMUST00000184561 445 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm9996-201ENSMUST00000070359 913 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm10179-201ENSMUST00000086233 688 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nrde2Q80XC6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm22133-201ENSMUST00000102082 109 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm11989-201ENSMUST00000117240 672 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm13035-201ENSMUST00000117496 342 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm11362-201ENSMUST00000118838 850 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm12208-201ENSMUST00000122004 163 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm20614-201ENSMUST00000177106 632 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm45219-201ENSMUST00000205602 465 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm1821-202ENSMUST00000227415 750 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm21811-201ENSMUST00000096485 930 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nrde2Q80XC6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nrde2Q80XC6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nrde2Q80XC6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nrde2Q80XC6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nrde2Q80XC6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nrde2Q80XC6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms