Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm10288-201ENSMUST00000084614 537 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vrk1Q80X41 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm23912-201ENSMUST00000104687 87 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm11667-201ENSMUST00000119828 486 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm12029-201ENSMUST00000120073 832 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm17391-201ENSMUST00000171036 126 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm8285-201ENSMUST00000208293 759 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm44551-201ENSMUST00000208804 171 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vrk1Q80X41 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.52□□□□□ -0.57
Vrk1Q80X41 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm8566-201ENSMUST00000120174 465 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm15782-201ENSMUST00000121073 445 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm27530-201ENSMUST00000184096 98 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Mir6546-201ENSMUST00000184460 62 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm10774-201ENSMUST00000188689 204 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms