Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm8100-201ENSMUST00000182906 988 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm7593-201ENSMUST00000187246 644 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm10774-201ENSMUST00000188689 204 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm8365-201ENSMUST00000197334 648 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm4157-201ENSMUST00000211647 679 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm5455-201ENSMUST00000058710 715 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm14724-201ENSMUST00000118400 537 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm4034-201ENSMUST00000187674 480 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm3332-201ENSMUST00000189337 928 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm5733-201ENSMUST00000190232 939 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm2965-201ENSMUST00000198365 343 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm9132-201ENSMUST00000210182 832 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm10288-201ENSMUST00000084614 537 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.17□□□□□ -0.3
Ush1gQ80T11 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush1gQ80T11 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms