Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Gm13035-201ENSMUST00000117496 342 ntBASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Gm45598-202ENSMUST00000210719 986 ntBASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf38bQ80SY5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm13600-201ENSMUST00000117949 744 ntBASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm27627-201ENSMUST00000183644 150 ntBASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm37201-201ENSMUST00000191845 523 ntBASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm19187-201ENSMUST00000206781 892 ntBASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm8325-201ENSMUST00000099086 453 ntBASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf38bQ80SY5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf38bQ80SY5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms