Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.23□□□□□ -0.61
Pif1Q80SX8 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.23□□□□□ -0.61
Pif1Q80SX8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Gm10051-201ENSMUST00000145209 414 ntBASIC11.23□□□□□ -0.61
Pif1Q80SX8 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.23□□□□□ -0.61
Pif1Q80SX8 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.23□□□□□ -0.61
Pif1Q80SX8 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.23□□□□□ -0.61
Pif1Q80SX8 Gm1821-202ENSMUST00000227415 750 ntBASIC11.23□□□□□ -0.61
Pif1Q80SX8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pif1Q80SX8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pif1Q80SX8 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm23251-201ENSMUST00000103773 110 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm15782-201ENSMUST00000121073 445 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm27438-201ENSMUST00000183480 110 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm37246-201ENSMUST00000192665 835 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm44126-201ENSMUST00000204831 514 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Matn2-203ENSMUST00000226766 3252 ntBASIC11.22□□□□□ -0.61
Pif1Q80SX8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.22□□□□□ -0.61
Pif1Q80SX8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.21□□□□□ -0.61
Pif1Q80SX8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms