Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm9062-201ENSMUST00000117712 727 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh8Q7TSK3 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm12176-201ENSMUST00000121420 875 ntBASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm44100-201ENSMUST00000204329 436 ntBASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh8Q7TSK3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh8Q7TSK3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh8Q7TSK3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms