Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Mir6958-201ENSMUST00000184207 73 ntBASIC12.54□□□□□ -0.4
Cspg5Q71M36 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.54□□□□□ -0.4
Cspg5Q71M36 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.54□□□□□ -0.4
Cspg5Q71M36 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.54□□□□□ -0.4
Cspg5Q71M36 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.54□□□□□ -0.4
Cspg5Q71M36 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cspg5Q71M36 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Gm19287-201ENSMUST00000203190 358 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 Gm19187-201ENSMUST00000206781 892 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.53□□□□□ -0.4
Cspg5Q71M36 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cspg5Q71M36 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.52□□□□□ -0.4
Cspg5Q71M36 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cspg5Q71M36 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cspg5Q71M36 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms