Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.2□□□□□ -0.78
Rif1Q6PR54 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm14639-201ENSMUST00000120850 866 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm28833-201ENSMUST00000189671 559 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm24294-201ENSMUST00000158295 277 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm5851-201ENSMUST00000194132 1204 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Cacna2d3-208ENSMUST00000225985 918 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.19□□□□□ -0.78
Rif1Q6PR54 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rif1Q6PR54 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms