Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gm14999-201ENSMUST00000121039 624 ntBASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gm5706-201ENSMUST00000181525 993 ntBASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gm18711-201ENSMUST00000199341 750 ntBASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Scaf4Q6PFF0 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm4984-201ENSMUST00000115987 360 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm15806-201ENSMUST00000120696 955 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm13570-201ENSMUST00000140763 309 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm7809-201ENSMUST00000153199 742 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm6222-202ENSMUST00000182143 629 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm3890-201ENSMUST00000182416 207 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm27839-201ENSMUST00000184242 106 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.84□□□□□ -0.51
Scaf4Q6PFF0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Scaf4Q6PFF0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Scaf4Q6PFF0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Scaf4Q6PFF0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
Scaf4Q6PFF0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms