Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Gm7488-201ENSMUST00000117148 684 ntBASIC12.82□□□□□ -0.36
CtifQ6PEE2 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.82□□□□□ -0.36
CtifQ6PEE2 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.82□□□□□ -0.36
CtifQ6PEE2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.82□□□□□ -0.36
CtifQ6PEE2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CtifQ6PEE2 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.81□□□□□ -0.36
CtifQ6PEE2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm25857-201ENSMUST00000082788 129 ntBASIC12.81□□□□□ -0.36
CtifQ6PEE2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CtifQ6PEE2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Gm6092-201ENSMUST00000121659 2029 ntBASIC12.8□□□□□ -0.36
CtifQ6PEE2 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.8□□□□□ -0.36
CtifQ6PEE2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Gm12490-201ENSMUST00000120255 560 ntBASIC12.8□□□□□ -0.36
CtifQ6PEE2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.8□□□□□ -0.36
CtifQ6PEE2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.8□□□□□ -0.36
CtifQ6PEE2 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.8□□□□□ -0.36
CtifQ6PEE2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CtifQ6PEE2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms