Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Snrnp40Q6PE01 Grk6-205ENSMUST00000224653 2976 ntBASIC10.59□□□□□ -0.71
Snrnp40Q6PE01 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Snrnp40Q6PE01 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.58□□□□□ -0.71
Snrnp40Q6PE01 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm12969-201ENSMUST00000120199 1004 ntBASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm15744-201ENSMUST00000161734 213 ntBASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm3150-201ENSMUST00000166418 204 ntBASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm9139-201ENSMUST00000218817 700 ntBASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Snrnp40Q6PE01 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Gm29410-201ENSMUST00000188383 694 ntBASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Gm3619-201ENSMUST00000219947 775 ntBASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Gm25201-201ENSMUST00000083093 170 ntBASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Gm23680-201ENSMUST00000083162 164 ntBASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Mir483-201ENSMUST00000093631 73 ntBASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms