Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Gm6170-201ENSMUST00000187672 1388 ntBASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slx4Q6P1D7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Gm15528-201ENSMUST00000117821 864 ntBASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Gm12036-201ENSMUST00000120008 530 ntBASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Gm6423-201ENSMUST00000204315 934 ntBASIC18.19■□□□□ 0.5
Slx4Q6P1D7 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 BC106175-202ENSMUST00000219344 1213 ntBASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Gm19046-201ENSMUST00000221263 1298 ntBASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 AC154305.2-201ENSMUST00000225813 901 ntBASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slx4Q6P1D7 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Gm8146-201ENSMUST00000192106 1847 ntBASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Gm15549-201ENSMUST00000121595 622 ntBASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Mir1905-201ENSMUST00000122779 82 ntBASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Gm16030-201ENSMUST00000159098 603 ntBASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Gm16167-201ENSMUST00000160428 1065 ntBASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Gm9415-201ENSMUST00000200462 1321 ntBASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slx4Q6P1D7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm12247-201ENSMUST00000117585 670 ntBASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm26368-201ENSMUST00000157826 118 ntBASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm44216-201ENSMUST00000203942 157 ntBASIC18.17■□□□□ 0.5
Slx4Q6P1D7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm18210-201ENSMUST00000209001 1524 ntBASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms