Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm15547-201ENSMUST00000122152 333 ntBASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Cts7-204ENSMUST00000225321 1257 ntBASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Gm10312-201ENSMUST00000078515 489 ntBASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sp140Q6NSQ5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sp140Q6NSQ5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sp140Q6NSQ5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.21□□□□□ -0.46
Sp140Q6NSQ5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sp140Q6NSQ5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sp140Q6NSQ5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sp140Q6NSQ5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sp140Q6NSQ5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.21□□□□□ -0.46
Sp140Q6NSQ5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Gm14644-201ENSMUST00000116671 647 ntBASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sp140Q6NSQ5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm11222-201ENSMUST00000119005 738 ntBASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm5186-201ENSMUST00000218781 920 ntBASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms