Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Gm23363-201ENSMUST00000175024 79 ntBASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Mir5132-201ENSMUST00000175166 71 ntBASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Gm26956-201ENSMUST00000182176 986 ntBASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sh3rf1Q69ZI1 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm22121-201ENSMUST00000175148 54 ntBASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sh3rf1Q69ZI1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sh3rf1Q69ZI1 Snord83b-201ENSMUST00000104546 94 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms