Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn1Q64347 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn1Q64347 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.33■□□□□ 0.04
Clcn1Q64347 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn1Q64347 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC15.33■□□□□ 0.04
Clcn1Q64347 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn1Q64347 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Clcn1Q64347 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn1Q64347 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.32■□□□□ 0.04
Clcn1Q64347 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Clcn1Q64347 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clcn1Q64347 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm10731-201ENSMUST00000181171 448 ntBASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm34023-201ENSMUST00000195539 217 ntBASIC15.32■□□□□ 0.04
Clcn1Q64347 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm2965-201ENSMUST00000198365 343 ntBASIC15.32■□□□□ 0.04
Clcn1Q64347 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.32■□□□□ 0.04
Clcn1Q64347 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC15.32■□□□□ 0.04
Clcn1Q64347 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.32■□□□□ 0.04
Clcn1Q64347 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn1Q64347 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clcn1Q64347 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.32■□□□□ 0.04
Clcn1Q64347 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.31■□□□□ 0.04
Clcn1Q64347 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.31■□□□□ 0.04
Clcn1Q64347 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Clcn1Q64347 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.31■□□□□ 0.04
Clcn1Q64347 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Clcn1Q64347 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.31■□□□□ 0.04
Clcn1Q64347 Gm38210-201ENSMUST00000191944 809 ntBASIC15.31■□□□□ 0.04
Clcn1Q64347 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.31■□□□□ 0.04
Clcn1Q64347 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.31■□□□□ 0.04
Clcn1Q64347 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.31■□□□□ 0.04
Clcn1Q64347 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Clcn1Q64347 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Clcn1Q64347 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Clcn1Q64347 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.31■□□□□ 0.04
Clcn1Q64347 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clcn1Q64347 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Clcn1Q64347 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.3■□□□□ 0.04
Clcn1Q64347 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Clcn1Q64347 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Mir8115-201ENSMUST00000184992 119 ntBASIC15.3■□□□□ 0.04
Clcn1Q64347 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Gm43058-201ENSMUST00000197645 625 ntBASIC15.3■□□□□ 0.04
Clcn1Q64347 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.3■□□□□ 0.04
Clcn1Q64347 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.3■□□□□ 0.04
Clcn1Q64347 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.3■□□□□ 0.04
Clcn1Q64347 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcn1Q64347 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 161.2 ms