Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn9aQ62205 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn9aQ62205 Gm43163-201ENSMUST00000196571 442 ntBASIC13.91□□□□□ -0.18
Scn9aQ62205 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.91□□□□□ -0.18
Scn9aQ62205 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.91□□□□□ -0.18
Scn9aQ62205 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scn9aQ62205 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn9aQ62205 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn9aQ62205 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.9□□□□□ -0.18
Scn9aQ62205 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn9aQ62205 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm11996-201ENSMUST00000117538 915 ntBASIC13.89□□□□□ -0.19
Scn9aQ62205 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm7741-201ENSMUST00000181445 989 ntBASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm26670-202ENSMUST00000226862 340 ntBASIC13.89□□□□□ -0.19
Scn9aQ62205 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.89□□□□□ -0.19
Scn9aQ62205 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm42511-201ENSMUST00000196160 234 ntBASIC13.89□□□□□ -0.19
Scn9aQ62205 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC13.89□□□□□ -0.19
Scn9aQ62205 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scn9aQ62205 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scn9aQ62205 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scn9aQ62205 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scn9aQ62205 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scn9aQ62205 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scn9aQ62205 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.88□□□□□ -0.19
Scn9aQ62205 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.88□□□□□ -0.19
Scn9aQ62205 Mir8093-201ENSMUST00000185043 137 ntBASIC13.88□□□□□ -0.19
Scn9aQ62205 Gm44216-201ENSMUST00000203942 157 ntBASIC13.88□□□□□ -0.19
Scn9aQ62205 Gm5996-201ENSMUST00000211110 718 ntBASIC13.88□□□□□ -0.19
Scn9aQ62205 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scn9aQ62205 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scn9aQ62205 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.88□□□□□ -0.19
Scn9aQ62205 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.88□□□□□ -0.19
Scn9aQ62205 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn9aQ62205 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn9aQ62205 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn9aQ62205 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn9aQ62205 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn9aQ62205 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn9aQ62205 Gm25492-201ENSMUST00000157383 129 ntBASIC13.87□□□□□ -0.19
Scn9aQ62205 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC13.87□□□□□ -0.19
Scn9aQ62205 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms