Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC10.97□□□□□ -0.65
VcanQ62059 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
VcanQ62059 Gm14113-201ENSMUST00000121399 976 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm14829-201ENSMUST00000121499 1138 ntBASIC10.97□□□□□ -0.65
VcanQ62059 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.97□□□□□ -0.65
VcanQ62059 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Gm9162-201ENSMUST00000182081 991 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.97□□□□□ -0.65
VcanQ62059 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Gm2594-201ENSMUST00000214774 742 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.97□□□□□ -0.65
VcanQ62059 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
VcanQ62059 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Gm24933-201ENSMUST00000103762 110 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm23252-201ENSMUST00000103776 110 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Gm12389-201ENSMUST00000117696 418 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm4943-201ENSMUST00000132879 424 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm26443-201ENSMUST00000179610 110 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.97□□□□□ -0.65
VcanQ62059 Gm5851-201ENSMUST00000194132 1204 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Gm7242-201ENSMUST00000221134 705 ntBASIC10.97□□□□□ -0.65
VcanQ62059 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
VcanQ62059 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
VcanQ62059 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
VcanQ62059 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.96□□□□□ -0.65
VcanQ62059 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.96□□□□□ -0.65
VcanQ62059 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.96□□□□□ -0.65
VcanQ62059 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC10.96□□□□□ -0.65
VcanQ62059 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Gm43163-201ENSMUST00000196571 442 ntBASIC10.96□□□□□ -0.65
VcanQ62059 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
VcanQ62059 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.96□□□□□ -0.65
VcanQ62059 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.96□□□□□ -0.65
VcanQ62059 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
VcanQ62059 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VcanQ62059 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.96□□□□□ -0.66
VcanQ62059 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.96□□□□□ -0.66
VcanQ62059 Gm25872-201ENSMUST00000177784 100 ntBASIC10.96□□□□□ -0.66
VcanQ62059 Mir6359-201ENSMUST00000183668 81 ntBASIC10.96□□□□□ -0.66
VcanQ62059 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.96□□□□□ -0.66
VcanQ62059 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.96□□□□□ -0.66
VcanQ62059 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.96□□□□□ -0.66
VcanQ62059 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
VcanQ62059 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
VcanQ62059 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.96□□□□□ -0.66
VcanQ62059 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.96□□□□□ -0.66
VcanQ62059 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.96□□□□□ -0.66
VcanQ62059 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VcanQ62059 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.96□□□□□ -0.66
VcanQ62059 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.95□□□□□ -0.66
VcanQ62059 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms