Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm13094-201ENSMUST00000117930 409 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm17221-201ENSMUST00000163909 481 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm17073-201ENSMUST00000168069 556 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm25148-201ENSMUST00000104611 123 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm16547-201ENSMUST00000159474 293 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col11a1Q61245 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.2□□□□□ -0.3
Col11a1Q61245 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.2□□□□□ -0.3
Col11a1Q61245 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC13.19□□□□□ -0.3
Col11a1Q61245 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.19□□□□□ -0.3
Col11a1Q61245 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Gm45094-201ENSMUST00000207013 617 ntBASIC13.19□□□□□ -0.3
Col11a1Q61245 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.19□□□□□ -0.3
Col11a1Q61245 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.19□□□□□ -0.3
Col11a1Q61245 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Gm9791-201ENSMUST00000060997 447 ntBASIC13.19□□□□□ -0.3
Col11a1Q61245 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.19□□□□□ -0.3
Col11a1Q61245 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.19□□□□□ -0.3
Col11a1Q61245 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col11a1Q61245 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col11a1Q61245 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Mir453-201ENSMUST00000104732 82 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm38344-201ENSMUST00000195306 1353 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm42660-201ENSMUST00000197733 947 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm30946-201ENSMUST00000198288 724 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm44814-201ENSMUST00000207018 434 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms